Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFPL1O75677 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.76□□□□□ -0.05
RFPL1O75677 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RFPL1O75677 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.76□□□□□ -0.05
RFPL1O75677 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFPL1O75677 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFPL1O75677 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFPL1O75677 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFPL1O75677 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 PPT1-213ENST00000641319 2388 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.75□□□□□ -0.05
RFPL1O75677 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RFPL1O75677 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 GCOM2-201ENST00000509133 1104 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 SLC25A47P1-201ENST00000531577 414 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.75□□□□□ -0.05
RFPL1O75677 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 AC103988.2-201ENST00000561804 725 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 AP001002.3-201ENST00000623482 206 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 TCAF1P1-201ENST00000414990 2232 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 AL133338.1-201ENST00000565695 1517 ntBASIC14.75□□□□□ -0.05
RFPL1O75677 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RFPL1O75677 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.75□□□□□ -0.05
RFPL1O75677 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.75□□□□□ -0.05
RFPL1O75677 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFPL1O75677 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RFPL1O75677 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.74□□□□□ -0.05
RFPL1O75677 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFPL1O75677 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.74□□□□□ -0.05
RFPL1O75677 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RFPL1O75677 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.74□□□□□ -0.05
RFPL1O75677 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.74□□□□□ -0.05
RFPL1O75677 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.74□□□□□ -0.05
RFPL1O75677 TDH-203ENST00000531764 1110 ntBASIC14.74□□□□□ -0.05
RFPL1O75677 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.74□□□□□ -0.05
RFPL1O75677 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.74□□□□□ -0.05
RFPL1O75677 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.74□□□□□ -0.05
RFPL1O75677 MIR5189-201ENST00000577370 114 ntBASIC14.74□□□□□ -0.05
RFPL1O75677 PDIA3P1-201ENST00000471856 1510 ntBASIC14.74□□□□□ -0.05
RFPL1O75677 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFPL1O75677 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFPL1O75677 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFPL1O75677 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms