Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.19□□□□□ -0.14
CPNE3O75131 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE3O75131 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE3O75131 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE3O75131 KRT8P29-201ENST00000420409 1371 ntBASIC14.19□□□□□ -0.14
CPNE3O75131 LILRP1-201ENST00000444199 1370 ntBASIC14.19□□□□□ -0.14
CPNE3O75131 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CPNE3O75131 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE3O75131 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE3O75131 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE3O75131 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CPNE3O75131 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CPNE3O75131 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.18□□□□□ -0.14
CPNE3O75131 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.18□□□□□ -0.14
CPNE3O75131 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 ACTG1P17-201ENST00000558391 1119 ntBASIC14.18□□□□□ -0.14
CPNE3O75131 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.18□□□□□ -0.14
CPNE3O75131 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 NDUFV2P1-201ENST00000596415 907 ntBASIC14.18□□□□□ -0.14
CPNE3O75131 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 AC011840.2-201ENST00000563063 1520 ntBASIC14.18□□□□□ -0.14
CPNE3O75131 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE3O75131 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CPNE3O75131 LINC01101-201ENST00000622953 1884 ntBASIC14.18□□□□□ -0.14
CPNE3O75131 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 AC112693.3-201ENST00000624819 1983 ntBASIC14.18□□□□□ -0.14
CPNE3O75131 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE3O75131 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE3O75131 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CPNE3O75131 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.17□□□□□ -0.14
CPNE3O75131 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
CPNE3O75131 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CPNE3O75131 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CPNE3O75131 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.17□□□□□ -0.14
CPNE3O75131 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.17□□□□□ -0.14
CPNE3O75131 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.17□□□□□ -0.14
CPNE3O75131 AC126365.1-201ENST00000578585 1514 ntBASIC14.17□□□□□ -0.14
CPNE3O75131 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CPNE3O75131 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE3O75131 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.17□□□□□ -0.14
CPNE3O75131 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.17□□□□□ -0.14
CPNE3O75131 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.17□□□□□ -0.14
CPNE3O75131 IGHJ2P-201ENST00000454480 60 ntBASIC14.17□□□□□ -0.14
CPNE3O75131 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms