Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1AO00322 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 AL136172.1-201ENST00000598590 1394 ntBASIC13.92□□□□□ -0.18
UPK1AO00322 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK1AO00322 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1AO00322 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1AO00322 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1AO00322 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1AO00322 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK1AO00322 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1AO00322 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1AO00322 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 MRPL37P1-201ENST00000592451 1337 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1AO00322 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
UPK1AO00322 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UPK1AO00322 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 FTH1P14-201ENST00000482930 551 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 AL391280.1-201ENST00000506969 1062 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 RNA5SP486-201ENST00000515961 83 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 ECM1P1-201ENST00000604092 1279 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1AO00322 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UPK1AO00322 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1AO00322 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1AO00322 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UPK1AO00322 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 AC004241.5-201ENST00000623870 2448 ntBASIC13.91□□□□□ -0.18
UPK1AO00322 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1AO00322 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1AO00322 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 AC090643.2-201ENST00000623442 2029 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 MYADML-201ENST00000474610 2147 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UPK1AO00322 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 AC016694.1-201ENST00000434179 700 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 AL590640.2-201ENST00000457038 527 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 343.3 ms