Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL358472.5-202ENST00000641448 1267 ntBASIC14.42□□□□□ -0.1
CDC7O00311 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.42□□□□□ -0.1
CDC7O00311 KRT8P28-201ENST00000433288 1390 ntBASIC14.42□□□□□ -0.1
CDC7O00311 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDC7O00311 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.42□□□□□ -0.1
CDC7O00311 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.42□□□□□ -0.1
CDC7O00311 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC7O00311 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC7O00311 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC7O00311 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC7O00311 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDC7O00311 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDC7O00311 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDC7O00311 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDC7O00311 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 CD8B2-202ENST00000417670 633 ntBASIC14.41□□□□□ -0.1
CDC7O00311 NME2P1-201ENST00000426182 414 ntBASIC14.41□□□□□ -0.1
CDC7O00311 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC7O00311 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.41□□□□□ -0.1
CDC7O00311 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.41□□□□□ -0.1
CDC7O00311 COX5BP1-201ENST00000507622 393 ntBASIC14.41□□□□□ -0.1
CDC7O00311 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CDC7O00311 RN7SL713P-201ENST00000582127 302 ntBASIC14.41□□□□□ -0.1
CDC7O00311 LINC02084-201ENST00000606069 1096 ntBASIC14.41□□□□□ -0.1
CDC7O00311 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.41□□□□□ -0.1
CDC7O00311 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC7O00311 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDC7O00311 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.41□□□□□ -0.1
CDC7O00311 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC7O00311 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC7O00311 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 MIR1202-201ENST00000408529 83 ntBASIC14.4□□□□□ -0.1
CDC7O00311 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC7O00311 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC7O00311 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC7O00311 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.4□□□□□ -0.1
CDC7O00311 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC7O00311 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.4□□□□□ -0.1
CDC7O00311 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms