Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 SHC1P1-201ENST00000425230 1745 ntBASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC018442.1-201ENST00000421439 2061 ntBASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC023824.1-201ENST00000562945 2975 ntBASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 E2F3P2-201ENST00000447755 1422 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CICP14-201ENST00000629111 2732 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 RHOQP1-201ENST00000555758 579 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 RN7SL163P-201ENST00000583100 276 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC004923.1-202ENST00000642106 209 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC018529.2-202ENST00000611482 3087 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 SALL4P5-201ENST00000419001 1760 ntBASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA2E9PIF3 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.27
NPIPA2E9PIF3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPA2E9PIF3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPA2E9PIF3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
NPIPA2E9PIF3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms