Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 KRT8P4-201ENST00000509735 1454 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC079776.1-201ENST00000401540 1152 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC026954.1-201ENST00000429771 1293 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CTBP2P5-201ENST00000454986 1264 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 C2orf69P2-201ENST00000562032 1123 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 PPY2P-201ENST00000582808 702 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AL358472.3-201ENST00000608147 415 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AL035252.4-201ENST00000624174 288 ntBASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC162PA2VCL2 AC011498.7-201ENST00000624986 2027 ntBASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AL136309.1-201ENST00000403917 691 ntBASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 KLF2P4-201ENST00000451959 1225 ntBASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RAB43P1-201ENST00000561790 589 ntBASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms