Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 OR52M2P-201ENST00000414298 959 ntBASIC19.58■□□□□ 0.72
PHF8Q9UPP1 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-214ENST00000418507 726 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 CHCHD2P2-201ENST00000503744 321 ntBASIC19.58■□□□□ 0.72
PHF8Q9UPP1 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 VENTXP3-201ENST00000546480 773 ntBASIC19.58■□□□□ 0.72
PHF8Q9UPP1 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 BPIFB5P-201ENST00000457066 1099 ntBASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 AC027139.1-201ENST00000565286 951 ntBASIC19.57■□□□□ 0.72
PHF8Q9UPP1 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 AL359091.4-201ENST00000610052 409 ntBASIC19.57■□□□□ 0.72
PHF8Q9UPP1 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 KRT8P18-201ENST00000413425 1445 ntBASIC19.57■□□□□ 0.72
PHF8Q9UPP1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.57■□□□□ 0.72
PHF8Q9UPP1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PHF8Q9UPP1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 HLA-DPA2-205ENST00000433582 733 ntBASIC19.56■□□□□ 0.72
PHF8Q9UPP1 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 AC083801.1-201ENST00000491689 358 ntBASIC19.56■□□□□ 0.72
PHF8Q9UPP1 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ALG1L3P-201ENST00000503331 765 ntBASIC19.56■□□□□ 0.72
PHF8Q9UPP1 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms