Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC215219.1-201ENST00000400706 1817 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 KRT18P28-201ENST00000453838 1332 ntBASIC13.17□□□□□ -0.3
COPS3Q9UNS2 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 RRP7BP-205ENST00000566851 833 ntBASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 AC011840.2-201ENST00000563063 1520 ntBASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS3Q9UNS2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 TLE1P1-201ENST00000422965 589 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC114812.1-204ENST00000449669 728 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AL359711.2-201ENST00000563105 872 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC093512.1-201ENST00000617969 520 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms