Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SORD2P-201ENST00000558556 1069 ntBASIC16.26■□□□□ 0.19
VTA1Q9NP79 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 RN7SL725P-201ENST00000606439 259 ntBASIC16.26■□□□□ 0.19
VTA1Q9NP79 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 AC013268.4-201ENST00000637413 2228 ntBASIC16.26■□□□□ 0.19
VTA1Q9NP79 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 LINC00528-201ENST00000600723 2160 ntBASIC16.26■□□□□ 0.19
VTA1Q9NP79 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.26■□□□□ 0.19
VTA1Q9NP79 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTA1Q9NP79 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 CTBP2P4-201ENST00000513884 920 ntBASIC16.25■□□□□ 0.19
VTA1Q9NP79 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AC107464.3-201ENST00000609172 737 ntBASIC16.25■□□□□ 0.19
VTA1Q9NP79 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 AC008741.2-201ENST00000612792 3115 ntBASIC16.25■□□□□ 0.19
VTA1Q9NP79 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.25■□□□□ 0.19
VTA1Q9NP79 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTA1Q9NP79 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 MIR645-201ENST00000385283 94 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 AL355334.1-201ENST00000417713 215 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 OR8T1P-201ENST00000421347 918 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 RPL18AP8-201ENST00000486071 528 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 LINC01815-202ENST00000641468 1409 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms