Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL118506.1-201ENST00000601296 3082 ntBASIC15.55■□□□□ 0.08
CD248Q9HCU0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AHCYP2-201ENST00000430630 1300 ntBASIC15.55■□□□□ 0.08
CD248Q9HCU0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.55■□□□□ 0.08
CD248Q9HCU0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD248Q9HCU0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD248Q9HCU0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms