Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AL592424.1-201ENST00000563624 1536 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC138035.3-201ENST00000622706 2791 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC104581.4-201ENST00000623126 3052 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 MIR557-201ENST00000385239 98 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 PHBP15-201ENST00000574228 665 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC090953.1-201ENST00000604305 1092 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 AP001184.1-201ENST00000637936 376 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AC136759.1-202ENST00000530858 2194 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PHOX2BQ99453 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PHOX2BQ99453 FRMPD2B-201ENST00000431305 1347 ntBASIC14.92□□□□□ -0.02
PHOX2BQ99453 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AL365209.1-201ENST00000624418 6473 ntBASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AL807761.2-201ENST00000422849 729 ntBASIC14.91□□□□□ -0.02
PHOX2BQ99453 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AP000911.2-201ENST00000534330 502 ntBASIC14.91□□□□□ -0.02
PHOX2BQ99453 DUX4L46-201ENST00000566845 751 ntBASIC14.91□□□□□ -0.02
PHOX2BQ99453 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PHOX2BQ99453 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms