Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 REXO1L6P-201ENST00000603433 1515 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 BRWD1P1-201ENST00000401091 371 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC012441.2-201ENST00000444843 739 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 RBM8B-201ENST00000555532 525 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC104982.3-201ENST00000581995 514 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC005962.1-201ENST00000584100 773 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC009884.2-201ENST00000603110 324 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AL513477.1-201ENST00000602865 2407 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 AC067750.1-201ENST00000608826 6545 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
GAFA1Q96PS6 KRT8P29-201ENST00000420409 1371 ntBASIC12.18□□□□□ -0.46
GAFA1Q96PS6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC012617.1-204ENST00000586340 2305 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC152010.1-201ENST00000415779 2006 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms