Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SLED1-202ENST00000512051 380 ntBASIC11.2□□□□□ -0.62
AP1S3Q96PC3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 AP3S2-216ENST00000617003 1561 ntBASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ZNF259P1-201ENST00000407656 1365 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AL450487.1-201ENST00000426799 995 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ADH5P3-201ENST00000433842 1137 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TIMM8BP1-201ENST00000452384 211 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC079140.1-201ENST00000508039 487 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC015910.1-201ENST00000579400 975 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SLC25A6P4-201ENST00000586535 553 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms