Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 RPL7P35-201ENST00000446943 740 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC008805.1-201ENST00000590892 364 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC138894.2-201ENST00000602838 371 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC007686.3-201ENST00000619017 3487 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC074138.1-201ENST00000611182 1303 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 OR2K2-202ENST00000374428 1038 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC010141.1-201ENST00000411585 623 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 RPS9P1-201ENST00000419943 583 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 FAM58BP-201ENST00000439056 645 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 KLF2P1-201ENST00000447438 1042 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC242376.2-201ENST00000619355 883 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRIM47Q96LD4 AJ011931.1-201ENST00000618749 2492 ntBASIC17.18■□□□□ 0.34
TRIM47Q96LD4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 WASH3P-207ENST00000560956 1394 ntBASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 POU5F1P2-201ENST00000521750 823 ntBASIC17.17■□□□□ 0.34
TRIM47Q96LD4 DNM1P30-201ENST00000563586 452 ntBASIC17.17■□□□□ 0.34
TRIM47Q96LD4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM47Q96LD4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms