Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 TCAM1P-207ENST00000485295 1537 ntBASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 AC012617.1-204ENST00000586340 2305 ntBASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 AL138799.1-201ENST00000448213 1675 ntBASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTN4IP1Q8WWV3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CICP20-201ENST00000443330 2801 ntBASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AL442647.2-201ENST00000429864 857 ntBASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 TMEM198B-204ENST00000484016 896 ntBASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 TERF1P3-201ENST00000505638 1227 ntBASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AC120045.2-201ENST00000567334 178 ntBASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.44□□□□□ -0.42
RTN4IP1Q8WWV3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTN4IP1Q8WWV3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms