Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 ENPP7P5-201ENST00000541031 1031 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AC123567.1-201ENST00000548294 1261 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 TMEM261P1-201ENST00000604899 340 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AC020658.7-201ENST00000624274 2442 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AC027612.1-201ENST00000445234 2395 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 POM121L8P-201ENST00000417732 1281 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 BASP1P1-201ENST00000430708 665 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AC245100.3-201ENST00000441281 285 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 POM121L9P-203ENST00000441984 1285 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AC022137.2-201ENST00000503482 481 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AP001063.1-201ENST00000568332 529 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 LINC02084-201ENST00000606069 1096 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PTENP1-202ENST00000532280 3996 ntBASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC44A1Q8WWI5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms