Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AC004945.1-201ENST00000416738 983 ntBASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 FAM197Y7-201ENST00000432892 766 ntBASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 PUDPP3-201ENST00000445368 636 ntBASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 AC139712.1-201ENST00000378256 1875 ntBASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TTC9CQ8N5M4 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC006001.1-201ENST00000325130 474 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 ARSEP1-201ENST00000420443 635 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms