Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 MIR6787-201ENST00000616675 61 ntBASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 AGAP7P-201ENST00000582299 2062 ntBASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 AGAP14-201ENST00000624701 2060 ntBASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM48Q8IWZ4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MIR1247-201ENST00000408206 136 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 KRT8P13-201ENST00000463294 1010 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AC100827.2-201ENST00000563214 1194 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 AC015656.1-201ENST00000624209 3578 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 SHC1P1-201ENST00000425230 1745 ntBASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM48Q8IWZ4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 GPAA1P2-201ENST00000417923 928 ntBASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms