Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 AC025181.2-201ENST00000606994 802 ntBASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 MIR6074-201ENST00000612054 107 ntBASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 MIR193BHG-211ENST00000641433 5365 ntBASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 PI4KAP2-201ENST00000360806 2080 ntBASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 AC104109.2-201ENST00000602919 1418 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 KRT8P23-201ENST00000560090 1207 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 AC084121.4-201ENST00000641598 221 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 AF228730.8-201ENST00000642140 221 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 GHET1-201ENST00000627071 1906 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms