Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 AC125604.1-201ENST00000496255 707 ntBASIC17.41■□□□□ 0.38
CTR9Q6PD62 RBM8B-201ENST00000555532 525 ntBASIC17.41■□□□□ 0.38
CTR9Q6PD62 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.4■□□□□ 0.38
CTR9Q6PD62 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTR9Q6PD62 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.4■□□□□ 0.38
CTR9Q6PD62 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CTR9Q6PD62 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTR9Q6PD62 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.39■□□□□ 0.38
CTR9Q6PD62 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.39■□□□□ 0.38
CTR9Q6PD62 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 ACTG1P2-201ENST00000415776 1125 ntBASIC17.39■□□□□ 0.37
CTR9Q6PD62 ACTG1P11-201ENST00000425411 1125 ntBASIC17.39■□□□□ 0.37
CTR9Q6PD62 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 AL805961.1-203ENST00000641078 1258 ntBASIC17.39■□□□□ 0.37
CTR9Q6PD62 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms