Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 SPDYE14P-201ENST00000442619 822 ntBASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GPS2P2-201ENST00000430745 888 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AC069262.1-201ENST00000539058 672 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 MIR4453-201ENST00000584019 89 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AC015911.4-201ENST00000588022 1070 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 MIR6080-201ENST00000617359 66 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 AL118506.1-201ENST00000601296 3082 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PEG13-201ENST00000631594 5667 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 NCLP1-201ENST00000445357 1963 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 CETN4P-206ENST00000642099 2168 ntBASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms