Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
PDE4BQ07343 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PDE4BQ07343 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE4BQ07343 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE4BQ07343 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.33■□□□□ 0.37
PDE4BQ07343 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 TMBIM7P-202ENST00000641474 1516 ntBASIC17.33■□□□□ 0.37
PDE4BQ07343 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE4BQ07343 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDE4BQ07343 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE4BQ07343 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PDE4BQ07343 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 AL008707.1-201ENST00000422498 534 ntBASIC17.33■□□□□ 0.36
PDE4BQ07343 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.33■□□□□ 0.36
PDE4BQ07343 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE4BQ07343 SCARNA21-201ENST00000517026 139 ntBASIC17.33■□□□□ 0.36
PDE4BQ07343 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE4BQ07343 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE4BQ07343 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE4BQ07343 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE4BQ07343 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE4BQ07343 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE4BQ07343 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE4BQ07343 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE4BQ07343 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE4BQ07343 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE4BQ07343 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDE4BQ07343 AC005089.1-201ENST00000619486 2241 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDE4BQ07343 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AC136759.1-202ENST00000530858 2194 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 AGGF1P1-201ENST00000509500 2073 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 FAM90A7P-201ENST00000382628 1395 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 FAM90A23P-201ENST00000400136 1395 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDE4BQ07343 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 AC011742.3-201ENST00000439053 820 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE4BQ07343 AC006122.1-201ENST00000493323 440 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE4BQ07343 AC022217.1-201ENST00000521069 738 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 NDUFV2P1-201ENST00000596415 907 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AL132994.2-201ENST00000603120 687 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 AL139099.5-201ENST00000635274 300 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDE4BQ07343 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDE4BQ07343 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE4BQ07343 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 AC140479.7-201ENST00000636301 2332 ntBASIC17.32■□□□□ 0.36
PDE4BQ07343 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE4BQ07343 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE4BQ07343 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE4BQ07343 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE4BQ07343 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE4BQ07343 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms