Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
IRX4P78413 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.41■□□□□ 0.06
IRX4P78413 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 AC004898.1-201ENST00000451057 766 ntBASIC15.41■□□□□ 0.06
IRX4P78413 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.41■□□□□ 0.06
IRX4P78413 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.41■□□□□ 0.06
IRX4P78413 SCARNA20.5-201ENST00000516991 142 ntBASIC15.41■□□□□ 0.06
IRX4P78413 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.41■□□□□ 0.06
IRX4P78413 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.41■□□□□ 0.06
IRX4P78413 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 AC104982.3-201ENST00000581995 514 ntBASIC15.41■□□□□ 0.06
IRX4P78413 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
IRX4P78413 AC015967.2-201ENST00000624092 234 ntBASIC15.41■□□□□ 0.06
IRX4P78413 AC006435.4-201ENST00000625037 234 ntBASIC15.41■□□□□ 0.06
IRX4P78413 AL356737.1-201ENST00000634391 234 ntBASIC15.41■□□□□ 0.06
IRX4P78413 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.41■□□□□ 0.06
IRX4P78413 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 AL121723.1-201ENST00000445194 1519 ntBASIC15.41■□□□□ 0.06
IRX4P78413 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 AC018529.2-202ENST00000611482 3087 ntBASIC15.41■□□□□ 0.06
IRX4P78413 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.4■□□□□ 0.06
IRX4P78413 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
IRX4P78413 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 HOMER2P2-201ENST00000451621 847 ntBASIC15.4■□□□□ 0.06
IRX4P78413 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.4■□□□□ 0.06
IRX4P78413 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 AP006547.1-201ENST00000563435 692 ntBASIC15.4■□□□□ 0.06
IRX4P78413 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.4■□□□□ 0.06
IRX4P78413 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.4■□□□□ 0.06
IRX4P78413 AC145423.3-201ENST00000615987 467 ntBASIC15.4■□□□□ 0.06
IRX4P78413 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.4■□□□□ 0.06
IRX4P78413 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.4■□□□□ 0.06
IRX4P78413 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
IRX4P78413 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IRX4P78413 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms