Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 MIR346-201ENST00000362234 95 ntBASIC13.21□□□□□ -0.29
VBP1P61758 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VBP1P61758 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 AC112191.1-201ENST00000523689 701 ntBASIC13.21□□□□□ -0.29
VBP1P61758 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
VBP1P61758 AC018845.2-201ENST00000568326 409 ntBASIC13.21□□□□□ -0.29
VBP1P61758 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 MIR6074-201ENST00000612054 107 ntBASIC13.21□□□□□ -0.29
VBP1P61758 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.21□□□□□ -0.29
VBP1P61758 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
VBP1P61758 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.21□□□□□ -0.3
VBP1P61758 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VBP1P61758 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.21□□□□□ -0.3
VBP1P61758 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.2□□□□□ -0.3
VBP1P61758 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 PCDHB19P-202ENST00000625133 2914 ntBASIC13.2□□□□□ -0.3
VBP1P61758 AC015819.3-201ENST00000624305 2674 ntBASIC13.2□□□□□ -0.3
VBP1P61758 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.2□□□□□ -0.3
VBP1P61758 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VBP1P61758 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 AC136604.1-202ENST00000425471 771 ntBASIC13.2□□□□□ -0.3
VBP1P61758 AC098831.1-202ENST00000438821 336 ntBASIC13.2□□□□□ -0.3
VBP1P61758 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.2□□□□□ -0.3
VBP1P61758 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.2□□□□□ -0.3
VBP1P61758 FAM215A-202ENST00000632077 792 ntBASIC13.2□□□□□ -0.3
VBP1P61758 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 AC102953.2-201ENST00000609755 3026 ntBASIC13.2□□□□□ -0.3
VBP1P61758 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.2□□□□□ -0.3
VBP1P61758 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VBP1P61758 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VBP1P61758 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms