Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 DRD5P1-201ENST00000456605 1438 ntBASIC13.49□□□□□ -0.25
CDC42P60953 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.49□□□□□ -0.25
CDC42P60953 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.49□□□□□ -0.25
CDC42P60953 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.49□□□□□ -0.25
CDC42P60953 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 AL512356.2-201ENST00000546955 174 ntBASIC13.49□□□□□ -0.25
CDC42P60953 DUX4L47-201ENST00000566374 394 ntBASIC13.49□□□□□ -0.25
CDC42P60953 MIR3687-2-201ENST00000577708 61 ntBASIC13.49□□□□□ -0.25
CDC42P60953 MIR4469-201ENST00000583919 79 ntBASIC13.49□□□□□ -0.25
CDC42P60953 AL596442.2-201ENST00000610240 980 ntBASIC13.49□□□□□ -0.25
CDC42P60953 MIR3687-1-201ENST00000614492 61 ntBASIC13.49□□□□□ -0.25
CDC42P60953 SPDYE12P-201ENST00000618416 771 ntBASIC13.49□□□□□ -0.25
CDC42P60953 AL158212.4-201ENST00000624062 1286 ntBASIC13.49□□□□□ -0.25
CDC42P60953 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CDC42P60953 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CDC42P60953 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDC42P60953 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC42P60953 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42P60953 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CDC42P60953 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDC42P60953 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CDC42P60953 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 MRPL37P1-201ENST00000592451 1337 ntBASIC13.48□□□□□ -0.25
CDC42P60953 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC42P60953 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42P60953 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC42P60953 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDC42P60953 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42P60953 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42P60953 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC42P60953 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC42P60953 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms