Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.26□□□□□ -0.29
SUMO3P55854 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.26□□□□□ -0.29
SUMO3P55854 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 AC021723.1-201ENST00000486306 515 ntBASIC13.26□□□□□ -0.29
SUMO3P55854 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.26□□□□□ -0.29
SUMO3P55854 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.26□□□□□ -0.29
SUMO3P55854 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.26□□□□□ -0.29
SUMO3P55854 AC005324.6-201ENST00000587972 613 ntBASIC13.26□□□□□ -0.29
SUMO3P55854 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 REXO1L6P-201ENST00000603433 1515 ntBASIC13.26□□□□□ -0.29
SUMO3P55854 AL096828.3-201ENST00000615354 462 ntBASIC13.26□□□□□ -0.29
SUMO3P55854 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
SUMO3P55854 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SUMO3P55854 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SUMO3P55854 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SUMO3P55854 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 AC011498.7-201ENST00000624986 2027 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 AC023908.3-201ENST00000564211 3047 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 AL009178.2-201ENST00000597278 2719 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 AL591846.1-201ENST00000451736 433 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.25□□□□□ -0.29
SUMO3P55854 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 AC005695.3-201ENST00000614522 232 ntBASIC13.25□□□□□ -0.29
SUMO3P55854 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.25□□□□□ -0.29
SUMO3P55854 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms