Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMSP52788 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMSP52788 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMSP52788 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 AC055811.4-201ENST00000624039 1754 ntBASIC13.86□□□□□ -0.19
SMSP52788 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 Z93015.1-201ENST00000451718 390 ntBASIC13.86□□□□□ -0.19
SMSP52788 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.86□□□□□ -0.19
SMSP52788 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.86□□□□□ -0.19
SMSP52788 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.86□□□□□ -0.19
SMSP52788 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.86□□□□□ -0.19
SMSP52788 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 AL359881.3-201ENST00000602640 1721 ntBASIC13.86□□□□□ -0.19
SMSP52788 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMSP52788 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMSP52788 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMSP52788 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 AL121723.1-201ENST00000445194 1519 ntBASIC13.85□□□□□ -0.19
SMSP52788 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SMSP52788 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SMSP52788 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SMSP52788 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.85□□□□□ -0.19
SMSP52788 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.85□□□□□ -0.19
SMSP52788 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.85□□□□□ -0.19
SMSP52788 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.85□□□□□ -0.19
SMSP52788 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.85□□□□□ -0.19
SMSP52788 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SMSP52788 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.85□□□□□ -0.19
SMSP52788 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.85□□□□□ -0.19
SMSP52788 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMSP52788 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.85□□□□□ -0.19
SMSP52788 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.85□□□□□ -0.19
SMSP52788 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms