Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AP006294.1-201ENST00000415407 339 ntBASIC13.13□□□□□ -0.31
SRP9P49458 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.13□□□□□ -0.31
SRP9P49458 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.13□□□□□ -0.31
SRP9P49458 AC120045.2-201ENST00000567334 178 ntBASIC13.13□□□□□ -0.31
SRP9P49458 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SRP9P49458 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.13□□□□□ -0.31
SRP9P49458 MIR8072-201ENST00000614241 80 ntBASIC13.13□□□□□ -0.31
SRP9P49458 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.13□□□□□ -0.31
SRP9P49458 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SRP9P49458 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SRP9P49458 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SRP9P49458 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SRP9P49458 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.12□□□□□ -0.31
SRP9P49458 AL162726.2-201ENST00000438986 1017 ntBASIC13.12□□□□□ -0.31
SRP9P49458 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.12□□□□□ -0.31
SRP9P49458 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 ELK1P1-201ENST00000485699 580 ntBASIC13.12□□□□□ -0.31
SRP9P49458 AC011495.1-201ENST00000498085 584 ntBASIC13.12□□□□□ -0.31
SRP9P49458 AC004066.1-201ENST00000502488 802 ntBASIC13.12□□□□□ -0.31
SRP9P49458 AC026410.3-201ENST00000514280 936 ntBASIC13.12□□□□□ -0.31
SRP9P49458 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.12□□□□□ -0.31
SRP9P49458 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SRP9P49458 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SRP9P49458 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SRP9P49458 AC004899.2-201ENST00000622993 3860 ntBASIC13.12□□□□□ -0.31
SRP9P49458 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SRP9P49458 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SRP9P49458 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 DRD5P1-201ENST00000456605 1438 ntBASIC13.12□□□□□ -0.31
SRP9P49458 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SRP9P49458 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 FAM90A12P-201ENST00000519497 2375 ntBASIC13.12□□□□□ -0.31
SRP9P49458 FAM90A24P-201ENST00000520792 2369 ntBASIC13.12□□□□□ -0.31
SRP9P49458 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SRP9P49458 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AC007787.1-201ENST00000588095 1583 ntBASIC13.11□□□□□ -0.31
SRP9P49458 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SRP9P49458 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SRP9P49458 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SRP9P49458 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms