Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 HSPA7-201ENST00000445535 1927 ntBASIC14.58□□□□□ -0.08
HMGCLP35914 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC144522.1-201ENST00000625111 1658 ntBASIC14.58□□□□□ -0.08
HMGCLP35914 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCLP35914 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 REXO1L6P-201ENST00000603433 1515 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 AC012617.1-204ENST00000586340 2305 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 BRWD1P1-201ENST00000401091 371 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGCLP35914 PFN1P12-201ENST00000455938 534 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGCLP35914 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 AL160314.3-201ENST00000556041 767 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.57□□□□□ -0.08
HMGCLP35914 BNIP3P13-201ENST00000599968 566 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 AC104506.1-201ENST00000609247 429 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 AC007663.3-201ENST00000609632 465 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HMGCLP35914 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.57□□□□□ -0.08
HMGCLP35914 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 AC027601.5-201ENST00000624065 2482 ntBASIC14.57□□□□□ -0.08
HMGCLP35914 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGCLP35914 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGCLP35914 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGCLP35914 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGCLP35914 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGCLP35914 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
HMGCLP35914 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 ACTBP11-201ENST00000436287 1126 ntBASIC14.56□□□□□ -0.08
HMGCLP35914 ST13P19-201ENST00000442505 1124 ntBASIC14.56□□□□□ -0.08
HMGCLP35914 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCLP35914 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCLP35914 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC005962.1-201ENST00000584100 773 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms