Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT9P35527 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 LRRC59-203ENST00000576448 1531 ntBASIC16.13■□□□□ 0.17
KRT9P35527 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT9P35527 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
KRT9P35527 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
KRT9P35527 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 EIF3FP3-201ENST00000434851 1086 ntBASIC16.12■□□□□ 0.17
KRT9P35527 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 KRT18P25-201ENST00000508931 1278 ntBASIC16.12■□□□□ 0.17
KRT9P35527 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT9P35527 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.12■□□□□ 0.17
KRT9P35527 AC138761.1-201ENST00000584393 385 ntBASIC16.12■□□□□ 0.17
KRT9P35527 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT9P35527 MIR6074-201ENST00000612054 107 ntBASIC16.12■□□□□ 0.17
KRT9P35527 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT9P35527 AL603764.1-201ENST00000636452 321 ntBASIC16.12■□□□□ 0.17
KRT9P35527 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
KRT9P35527 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 MRPL37P1-201ENST00000592451 1337 ntBASIC16.12■□□□□ 0.17
KRT9P35527 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
KRT9P35527 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT9P35527 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT9P35527 AC015688.4-201ENST00000580780 1647 ntBASIC16.12■□□□□ 0.17
KRT9P35527 AC087386.2-201ENST00000623212 4637 ntBASIC16.12■□□□□ 0.17
KRT9P35527 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 HSPA8P5-201ENST00000456928 2069 ntBASIC16.11■□□□□ 0.17
KRT9P35527 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT9P35527 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT9P35527 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT9P35527 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT9P35527 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT9P35527 AC009486.1-201ENST00000569860 813 ntBASIC16.11■□□□□ 0.17
KRT9P35527 CLUHP6-201ENST00000580789 941 ntBASIC16.11■□□□□ 0.17
KRT9P35527 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT9P35527 AC027307.3-201ENST00000594262 1100 ntBASIC16.11■□□□□ 0.17
KRT9P35527 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT9P35527 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.11■□□□□ 0.17
KRT9P35527 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KRT9P35527 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT9P35527 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT9P35527 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT9P35527 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms