Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.18■□□□□ 0.5
RFC4P35249 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 RN7SL564P-201ENST00000496309 250 ntBASIC18.18■□□□□ 0.5
RFC4P35249 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
RFC4P35249 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.18■□□□□ 0.5
RFC4P35249 NDUFB10P1-201ENST00000567319 521 ntBASIC18.18■□□□□ 0.5
RFC4P35249 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.18■□□□□ 0.5
RFC4P35249 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.18■□□□□ 0.5
RFC4P35249 AC006548.2-201ENST00000605217 529 ntBASIC18.18■□□□□ 0.5
RFC4P35249 AC018695.6-201ENST00000614011 534 ntBASIC18.18■□□□□ 0.5
RFC4P35249 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.18■□□□□ 0.5
RFC4P35249 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFC4P35249 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.18■□□□□ 0.5
RFC4P35249 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFC4P35249 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFC4P35249 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC4P35249 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 OR51A9P-201ENST00000422578 911 ntBASIC18.17■□□□□ 0.5
RFC4P35249 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.17■□□□□ 0.5
RFC4P35249 RN7SL582P-201ENST00000491078 279 ntBASIC18.17■□□□□ 0.5
RFC4P35249 RN7SL767P-201ENST00000493013 295 ntBASIC18.17■□□□□ 0.5
RFC4P35249 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.17■□□□□ 0.5
RFC4P35249 TREHP1-201ENST00000531328 465 ntBASIC18.17■□□□□ 0.5
RFC4P35249 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC4P35249 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC4P35249 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC4P35249 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC4P35249 AC010632.2-201ENST00000588369 1224 ntBASIC18.17■□□□□ 0.5
RFC4P35249 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.17■□□□□ 0.5
RFC4P35249 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC4P35249 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
RFC4P35249 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RFC4P35249 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 DOC2GP-204ENST00000639052 2548 ntBASIC18.17■□□□□ 0.5
RFC4P35249 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.17■□□□□ 0.5
RFC4P35249 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC4P35249 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 LAP3P2-201ENST00000454686 1454 ntBASIC18.16■□□□□ 0.5
RFC4P35249 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
RFC4P35249 GOLGA2P7-209ENST00000560408 745 ntBASIC18.16■□□□□ 0.5
RFC4P35249 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.16■□□□□ 0.5
RFC4P35249 AL021707.6-201ENST00000609212 491 ntBASIC18.16■□□□□ 0.5
RFC4P35249 ACE3P-201ENST00000423435 1973 ntBASIC18.16■□□□□ 0.5
RFC4P35249 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC4P35249 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms