Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PTPN6P29350 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTPN6P29350 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 AL590440.2-201ENST00000641973 1595 ntBASIC13.96□□□□□ -0.17
PTPN6P29350 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 AC015818.8-201ENST00000587907 1519 ntBASIC13.96□□□□□ -0.17
PTPN6P29350 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.96□□□□□ -0.17
PTPN6P29350 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
PTPN6P29350 ARSEP1-201ENST00000420443 635 ntBASIC13.96□□□□□ -0.17
PTPN6P29350 KRT43P-201ENST00000434019 910 ntBASIC13.96□□□□□ -0.17
PTPN6P29350 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.96□□□□□ -0.17
PTPN6P29350 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.96□□□□□ -0.17
PTPN6P29350 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
PTPN6P29350 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTPN6P29350 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.96□□□□□ -0.17
PTPN6P29350 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PTPN6P29350 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
PTPN6P29350 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PTPN6P29350 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
PTPN6P29350 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PTPN6P29350 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTPN6P29350 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.95□□□□□ -0.18
PTPN6P29350 AC244107.1-201ENST00000442033 332 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 BCRP2-202ENST00000447763 634 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.95□□□□□ -0.18
PTPN6P29350 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 KRT18P25-201ENST00000508931 1278 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 BCRP6-201ENST00000510112 632 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 BCRP7-201ENST00000511549 544 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 AL512343.1-201ENST00000605837 169 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 ST20-AS1-201ENST00000560255 4223 ntBASIC13.95□□□□□ -0.18
PTPN6P29350 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.95□□□□□ -0.18
PTPN6P29350 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms