Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EPHA3P29320 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.35□□□□□ -0.11
EPHA3P29320 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 IGHV3-42-201ENST00000520410 361 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.35□□□□□ -0.11
EPHA3P29320 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.35□□□□□ -0.11
EPHA3P29320 AC131206.1-201ENST00000538078 1211 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 AC023310.3-201ENST00000557027 670 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 AC100756.1-201ENST00000562736 682 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 AC138749.3-201ENST00000567691 622 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 AC116165.1-201ENST00000611806 668 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 AC020658.7-201ENST00000624274 2442 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA3P29320 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 AL365181.3-201ENST00000605886 3222 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC072061.1-201ENST00000569710 2234 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA3P29320 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA3P29320 MIR943-201ENST00000401286 94 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC067863.1-201ENST00000494933 530 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.34□□□□□ -0.11
EPHA3P29320 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 AP001582.1-201ENST00000525856 295 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC104794.3-201ENST00000566840 1248 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 AC120045.2-201ENST00000567334 178 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.34□□□□□ -0.11
EPHA3P29320 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 BRI3BPP1-201ENST00000594224 787 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA3P29320 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA3P29320 INTS4P2-202ENST00000614726 2019 ntBASIC14.34□□□□□ -0.11
EPHA3P29320 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EPHA3P29320 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA3P29320 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EPHA3P29320 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
EPHA3P29320 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA3P29320 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA3P29320 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA3P29320 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA3P29320 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms