Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 TUBB1P2-201ENST00000422712 1306 ntBASIC14.58□□□□□ -0.08
VARSP26640 KRT8P35-201ENST00000483942 1338 ntBASIC14.58□□□□□ -0.08
VARSP26640 TUBB1P1-201ENST00000503144 1300 ntBASIC14.58□□□□□ -0.08
VARSP26640 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 REXO1L6P-201ENST00000603433 1515 ntBASIC14.57□□□□□ -0.08
VARSP26640 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VARSP26640 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 ACKR1-201ENST00000368121 1240 ntBASIC14.57□□□□□ -0.08
VARSP26640 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 RNA5SP412-201ENST00000516234 123 ntBASIC14.57□□□□□ -0.08
VARSP26640 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.57□□□□□ -0.08
VARSP26640 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VARSP26640 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 AC015802.1-201ENST00000588104 1449 ntBASIC14.57□□□□□ -0.08
VARSP26640 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VARSP26640 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VARSP26640 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.56□□□□□ -0.08
VARSP26640 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VARSP26640 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.56□□□□□ -0.08
VARSP26640 BRWD1P1-201ENST00000401091 371 ntBASIC14.56□□□□□ -0.08
VARSP26640 ACTBP8-201ENST00000403258 1108 ntBASIC14.56□□□□□ -0.08
VARSP26640 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
VARSP26640 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.56□□□□□ -0.08
VARSP26640 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.56□□□□□ -0.08
VARSP26640 FAM21FP-201ENST00000426241 1131 ntBASIC14.56□□□□□ -0.08
VARSP26640 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms