Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 AL161670.2-201ENST00000557650 1227 ntBASIC12.64□□□□□ -0.39
CD40P25942 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 AC012183.1-201ENST00000625197 499 ntBASIC12.64□□□□□ -0.39
CD40P25942 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.64□□□□□ -0.39
CD40P25942 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.64□□□□□ -0.39
CD40P25942 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.64□□□□□ -0.39
CD40P25942 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.64□□□□□ -0.39
CD40P25942 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD40P25942 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 AL596257.1-201ENST00000641463 2694 ntBASIC12.63□□□□□ -0.39
CD40P25942 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CD40P25942 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.63□□□□□ -0.39
CD40P25942 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.63□□□□□ -0.39
CD40P25942 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 AC006335.1-201ENST00000445200 547 ntBASIC12.63□□□□□ -0.39
CD40P25942 UPF3AP2-201ENST00000457924 1132 ntBASIC12.63□□□□□ -0.39
CD40P25942 AC012618.1-201ENST00000461223 412 ntBASIC12.63□□□□□ -0.39
CD40P25942 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.63□□□□□ -0.39
CD40P25942 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.63□□□□□ -0.39
CD40P25942 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 AC106872.11-201ENST00000605838 421 ntBASIC12.63□□□□□ -0.39
CD40P25942 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CD40P25942 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.63□□□□□ -0.39
CD40P25942 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD40P25942 FGD5P1-202ENST00000614866 2498 ntBASIC12.63□□□□□ -0.39
CD40P25942 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CD40P25942 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms