Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 AL034417.4-201ENST00000641354 2101 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 AC114271.1-201ENST00000612689 2813 ntBASIC12.51□□□□□ -0.41
VAMP1P23763 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VAMP1P23763 AC074338.1-201ENST00000416825 156 ntBASIC12.51□□□□□ -0.41
VAMP1P23763 KRT18P64-201ENST00000434946 1219 ntBASIC12.51□□□□□ -0.41
VAMP1P23763 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.51□□□□□ -0.41
VAMP1P23763 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.51□□□□□ -0.41
VAMP1P23763 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 AC004241.5-201ENST00000623870 2448 ntBASIC12.51□□□□□ -0.41
VAMP1P23763 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.51□□□□□ -0.41
VAMP1P23763 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
VAMP1P23763 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.51□□□□□ -0.41
VAMP1P23763 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VAMP1P23763 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VAMP1P23763 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 DNM1P41-201ENST00000623634 3350 ntBASIC12.5□□□□□ -0.41
VAMP1P23763 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VAMP1P23763 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 SPDYE17-201ENST00000412399 783 ntBASIC12.5□□□□□ -0.41
VAMP1P23763 AC079781.3-201ENST00000449110 356 ntBASIC12.5□□□□□ -0.41
VAMP1P23763 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 AC079140.1-201ENST00000508039 487 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms