Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.62□□□□□ -0.39
CCL1P22362 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 AC010141.1-201ENST00000411585 623 ntBASIC12.61□□□□□ -0.39
CCL1P22362 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL1P22362 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL1P22362 RN7SL837P-201ENST00000463010 287 ntBASIC12.61□□□□□ -0.39
CCL1P22362 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.61□□□□□ -0.39
CCL1P22362 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL1P22362 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL1P22362 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.61□□□□□ -0.39
CCL1P22362 AC073413.1-201ENST00000603927 732 ntBASIC12.61□□□□□ -0.39
CCL1P22362 AL358472.3-201ENST00000608147 415 ntBASIC12.61□□□□□ -0.39
CCL1P22362 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.61□□□□□ -0.39
CCL1P22362 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL1P22362 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL1P22362 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CCL1P22362 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL1P22362 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CCL1P22362 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.6□□□□□ -0.39
CCL1P22362 CNN2P8-201ENST00000421872 913 ntBASIC12.6□□□□□ -0.39
CCL1P22362 FAM197Y7-201ENST00000432892 766 ntBASIC12.6□□□□□ -0.39
CCL1P22362 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 SLC25A47P1-201ENST00000531577 414 ntBASIC12.6□□□□□ -0.39
CCL1P22362 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL1P22362 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL1P22362 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 AC233724.13-201ENST00000598383 410 ntBASIC12.6□□□□□ -0.39
CCL1P22362 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 BAP1-211ENST00000615113 489 ntBASIC12.6□□□□□ -0.39
CCL1P22362 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms