Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 AC079776.1-201ENST00000401540 1152 ntBASIC15.21■□□□□ 0.03
CD48P09326 AL136309.1-201ENST00000403917 691 ntBASIC15.21■□□□□ 0.03
CD48P09326 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.21■□□□□ 0.03
CD48P09326 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.21■□□□□ 0.03
CD48P09326 U91328.1-201ENST00000437528 223 ntBASIC15.21■□□□□ 0.03
CD48P09326 GAPDHP21-201ENST00000450301 1010 ntBASIC15.21■□□□□ 0.03
CD48P09326 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CD48P09326 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.21■□□□□ 0.03
CD48P09326 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CD48P09326 SNX29P1-201ENST00000548357 1007 ntBASIC15.21■□□□□ 0.03
CD48P09326 AP006547.1-201ENST00000563435 692 ntBASIC15.21■□□□□ 0.03
CD48P09326 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 RHOXF1P1-202ENST00000635473 501 ntBASIC15.21■□□□□ 0.03
CD48P09326 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CD48P09326 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.21■□□□□ 0.02
CD48P09326 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.21■□□□□ 0.02
CD48P09326 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CD48P09326 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD48P09326 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.21■□□□□ 0.02
CD48P09326 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD48P09326 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
CD48P09326 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CD48P09326 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CD48P09326 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 PKD1P5-201ENST00000532415 10291 ntBASIC15.2■□□□□ 0.02
CD48P09326 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.2■□□□□ 0.02
CD48P09326 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 CNN2P10-201ENST00000443067 918 ntBASIC15.2■□□□□ 0.02
CD48P09326 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.2■□□□□ 0.02
CD48P09326 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.2■□□□□ 0.02
CD48P09326 KRT17P8-201ENST00000540749 863 ntBASIC15.2■□□□□ 0.02
CD48P09326 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 AL512343.1-201ENST00000605837 169 ntBASIC15.2■□□□□ 0.02
CD48P09326 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CD48P09326 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD48P09326 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CD48P09326 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 AC005252.3-201ENST00000623855 2258 ntBASIC15.19■□□□□ 0.02
CD48P09326 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 HIST2H2BB-201ENST00000449108 381 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms