Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 AL049840.2-201ENST00000602722 535 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 AL031590.1-202ENST00000641466 1737 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC9.04□□□□□ -0.96
PKHD1P08F94 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 WDR54-202ENST00000409791 854 ntTSL 3 BASIC9.04□□□□□ -0.96
PKHD1P08F94 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC9.04□□□□□ -0.96
PKHD1P08F94 CCND3P1-201ENST00000438347 580 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 SRPK2P-201ENST00000523408 1100 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 TPST2P1-201ENST00000564073 1102 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC9.04□□□□□ -0.96
PKHD1P08F94 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.04□□□□□ -0.96
PKHD1P08F94 AC139100.2-201ENST00000616901 662 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 CCT8L1P-201ENST00000465400 1674 ntBASIC9.04□□□□□ -0.96
PKHD1P08F94 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PKHD1P08F94 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.04□□□□□ -0.96
PKHD1P08F94 FES-203ENST00000394302 2133 ntTSL 5 BASIC9.04□□□□□ -0.96
PKHD1P08F94 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 RN7SL76P-201ENST00000482435 289 ntBASIC9.03□□□□□ -0.96
PKHD1P08F94 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC9.03□□□□□ -0.96
PKHD1P08F94 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PKHD1P08F94 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC104506.1-201ENST00000609247 429 ntBASIC9.03□□□□□ -0.96
PKHD1P08F94 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC9.03□□□□□ -0.96
PKHD1P08F94 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PKHD1P08F94 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 SSR4-202ENST00000370085 526 ntTSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC022121.1-201ENST00000484584 579 ntBASIC9.03□□□□□ -0.96
PKHD1P08F94 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC9.03□□□□□ -0.96
PKHD1P08F94 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC9.03□□□□□ -0.96
PKHD1P08F94 FAM187B2P-201ENST00000577135 713 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms