Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.54■□□□□ 0.4
MYCNP04198 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MYCNP04198 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 AHCYP2-201ENST00000430630 1300 ntBASIC17.54■□□□□ 0.4
MYCNP04198 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MYCNP04198 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 HMGB1P32-201ENST00000425971 565 ntBASIC17.54■□□□□ 0.4
MYCNP04198 CALR4P-201ENST00000431943 946 ntBASIC17.54■□□□□ 0.4
MYCNP04198 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 AL590640.2-201ENST00000457038 527 ntBASIC17.54■□□□□ 0.4
MYCNP04198 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 MTCO1P55-201ENST00000489829 745 ntBASIC17.54■□□□□ 0.4
MYCNP04198 AC107401.1-201ENST00000503426 685 ntBASIC17.54■□□□□ 0.4
MYCNP04198 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 KRT18P25-201ENST00000508931 1278 ntBASIC17.54■□□□□ 0.4
MYCNP04198 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 RNA5SP423-201ENST00000517127 109 ntBASIC17.54■□□□□ 0.4
MYCNP04198 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 HNRNPUP1-201ENST00000554987 333 ntBASIC17.54■□□□□ 0.4
MYCNP04198 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 AC025279.2-201ENST00000569730 653 ntBASIC17.54■□□□□ 0.4
MYCNP04198 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC17.54■□□□□ 0.4
MYCNP04198 RNU4-5P-201ENST00000607255 135 ntBASIC17.54■□□□□ 0.4
MYCNP04198 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 AC011939.3-201ENST00000613686 466 ntBASIC17.54■□□□□ 0.4
MYCNP04198 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC17.54■□□□□ 0.4
MYCNP04198 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MYCNP04198 AC004808.2-201ENST00000627965 773 ntBASIC17.54■□□□□ 0.4
MYCNP04198 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 AC244452.3-201ENST00000636814 210 ntBASIC17.54■□□□□ 0.4
MYCNP04198 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.54■□□□□ 0.4
MYCNP04198 AC132872.4-202ENST00000622924 2756 ntBASIC17.54■□□□□ 0.4
MYCNP04198 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
MYCNP04198 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.54■□□□□ 0.4
MYCNP04198 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
MYCNP04198 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MYCNP04198 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
MYCNP04198 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.53■□□□□ 0.4
MYCNP04198 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MYCNP04198 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
MYCNP04198 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MYCNP04198 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.53■□□□□ 0.4
MYCNP04198 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 ANKRD7-201ENST00000265224 1298 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 CIB4-201ENST00000288861 773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MYCNP04198 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.53■□□□□ 0.4
MYCNP04198 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms