Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 UGT1A2P-201ENST00000454886 866 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 GIMAP3P-201ENST00000495150 836 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 SERBP1P5-201ENST00000510079 1181 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AP005019.2-201ENST00000615104 511 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AL136172.1-201ENST00000598590 1394 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 AL805961.2-201ENST00000642139 4817 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 PTPRVP-205ENST00000641549 5067 ntBASIC13.29□□□□□ -0.28
HLA-DQA2P01906 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA2P01906 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AC136759.1-202ENST00000530858 2194 ntBASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AL928921.2-201ENST00000641325 2442 ntBASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SPTLC1P1-201ENST00000447199 261 ntBASIC13.28□□□□□ -0.28
HLA-DQA2P01906 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 AL603764.1-201ENST00000636452 321 ntBASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
HLA-DQA2P01906 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms