Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 AC015818.8-201ENST00000587907 1519 ntBASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NPIPB9F8W1W9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 FAM58BP-201ENST00000439056 645 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 HSPB1P2-201ENST00000448722 546 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 IGHV3-71-201ENST00000523324 359 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AC005252.3-201ENST00000623855 2258 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 TUBB8P4-201ENST00000511806 1324 ntBASIC13.38□□□□□ -0.27
NPIPB9F8W1W9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 KRT8P24-201ENST00000560290 1559 ntBASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AC011474.4-201ENST00000623523 2076 ntBASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 MIR658-201ENST00000385210 100 ntBASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 ST13P19-201ENST00000442505 1124 ntBASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB9F8W1W9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms