Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AC012441.2-201ENST00000444843 739 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 CTBP2P5-201ENST00000454986 1264 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RBM8B-201ENST00000555532 525 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AC009884.2-201ENST00000603110 324 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AL512343.1-201ENST00000605837 169 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AC067750.1-201ENST00000608826 6545 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 LAP3P2-201ENST00000454686 1454 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 E2F3P2-201ENST00000447755 1422 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AL022313.4-201ENST00000562756 2046 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CICP16-201ENST00000502609 2813 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AC079776.1-201ENST00000401540 1152 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AL354877.1-201ENST00000424412 413 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AC100850.1-201ENST00000506768 649 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AC104989.1-201ENST00000519711 778 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RAB43P1-201ENST00000561790 589 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 EEF1DP1-201ENST00000585891 896 ntBASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPB4C9JG80 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms