Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DRD5P1-201ENST00000456605 1438 ntBASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 REXO1L4P-201ENST00000605109 1937 ntBASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AC012508.2-201ENST00000567613 1472 ntBASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AC000095.1-201ENST00000603208 874 ntBASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 AL022328.1-201ENST00000610050 478 ntBASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX49Q9Y6V7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX49Q9Y6V7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC134312.5-201ENST00000568031 1313 ntBASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 BAATP1-201ENST00000412284 1225 ntBASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC107373.2-201ENST00000607735 490 ntBASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX49Q9Y6V7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX49Q9Y6V7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DDX49Q9Y6V7 AL359183.1-201ENST00000623796 2132 ntBASIC17.75■□□□□ 0.43
DDX49Q9Y6V7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX49Q9Y6V7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms