Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC008132.1-202ENST00000342005 1389 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC078875.1-201ENST00000431907 724 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC245884.6-201ENST00000515672 1067 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC090857.1-201ENST00000527400 390 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AC006504.5-208ENST00000588784 2401 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 DBET-201ENST00000630918 3363 ntBASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00588Q9Y4M8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 CYP4F23P-201ENST00000593402 1579 ntBASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 UPF3AP2-201ENST00000457924 1132 ntBASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC012618.1-201ENST00000461223 412 ntBASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC024681.1-201ENST00000521917 487 ntBASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms