Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 KRT8P4-201ENST00000509735 1454 ntBASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3AQ9Y2J0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC118758.2-201ENST00000614242 2813 ntBASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 MESTP3-201ENST00000503460 968 ntBASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC106820.3-201ENST00000561653 397 ntBASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC023908.3-201ENST00000564211 3047 ntBASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 AC011840.2-201ENST00000563063 1520 ntBASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RPH3AQ9Y2J0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms