Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HTR5BP-201ENST00000430851 1154 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC025048.3-201ENST00000590609 569 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC022145.2-201ENST00000598203 171 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC120114.3-201ENST00000611923 658 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC005702.4-201ENST00000618393 416 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AF228730.6-201ENST00000641497 218 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC084121.3-201ENST00000641716 218 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC012617.1-204ENST00000586340 2305 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AC011481.3-201ENST00000623895 5594 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CD82-202ENST00000342935 967 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 FAM58DP-201ENST00000428076 619 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RBPMS2P1-201ENST00000437762 623 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RPL13P2-201ENST00000440687 659 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AL589739.1-201ENST00000607720 493 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AC074044.1-201ENST00000609673 707 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms