Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AL161932.2-201ENST00000435436 679 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC092183.1-201ENST00000469884 875 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC068587.3-201ENST00000526613 355 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC106820.3-201ENST00000561653 397 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC005586.2-201ENST00000563946 837 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 WASH4P-201ENST00000564273 1246 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AL157996.1-201ENST00000624684 2299 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AC111170.3-201ENST00000624282 2464 ntBASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 MIR770-201ENST00000390219 98 ntBASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 LINC02560-201ENST00000596379 459 ntBASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AC132938.4-201ENST00000623835 848 ntBASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 AL137784.3-201ENST00000623858 2288 ntBASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM38AQ9H6F2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms