Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 LINC01230-201ENST00000625222 3017 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 CLUHP2-201ENST00000426660 1303 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM2Q9C040 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM2Q9C040 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.58□□□□□ -0.23
TRIM2Q9C040 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM2Q9C040 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM2Q9C040 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRIM2Q9C040 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM2Q9C040 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC015688.4-201ENST00000580780 1647 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC090505.1-201ENST00000430515 1834 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 POM121L8P-201ENST00000417732 1281 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 POM121L9P-203ENST00000441984 1285 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC015936.2-201ENST00000593177 259 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC138466.3-201ENST00000619983 221 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC131212.3-201ENST00000624087 4219 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.58□□□□□ -0.24
TRIM2Q9C040 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM2Q9C040 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM2Q9C040 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 AC117489.1-201ENST00000625169 3217 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms