Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LINC00265-2P-201ENST00000413372 782 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AQP7P5-201ENST00000428759 1049 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AQP7P4-201ENST00000447083 1042 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AQP7P2-201ENST00000453967 1041 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 MYADML-201ENST00000474610 2147 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AC093826.1-201ENST00000508655 993 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 IGHV1-12-201ENST00000518307 205 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AC104506.1-201ENST00000609247 429 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 AQP7P3-201ENST00000624547 1041 ntBASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11YQ9BZA8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH11YQ9BZA8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH11YQ9BZA8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 BX679664.3-201ENST00000414070 555 ntBASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AC113935.1-201ENST00000471722 555 ntBASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 KLF17P1-201ENST00000547105 1126 ntBASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AL118522.1-201ENST00000611368 560 ntBASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 AC064801.2-201ENST00000625052 1303 ntBASIC18.7■□□□□ 0.58
PCDH11YQ9BZA8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11YQ9BZA8 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms